CDS

Accession Number TCMCG066C23408
gbkey CDS
Protein Id XP_034599002.1
Location join(3783829..3784509,3785109..3785315,3786106..3786974,3787067..3787364,3787901..3788845,3789191..3789462,3789755..3790256)
Gene LOC117859914
GeneID 117859914
Organism Setaria viridis

Protein

Length 1257aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA633601
db_source XM_034743111.1
Definition DNA-directed RNA polymerase D subunit 2b-like [Setaria viridis]

EGGNOG-MAPPER Annotation

COG_category K
Description DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
KEGG_TC -
KEGG_Module M00180        [VIEW IN KEGG]
KEGG_Reaction R00435        [VIEW IN KEGG]
R00441        [VIEW IN KEGG]
R00442        [VIEW IN KEGG]
R00443        [VIEW IN KEGG]
KEGG_rclass RC02795        [VIEW IN KEGG]
BRITE br01611        [VIEW IN KEGG]
ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K03010        [VIEW IN KEGG]
ko:K16252        [VIEW IN KEGG]
EC 2.7.7.6        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00230        [VIEW IN KEGG]
ko00240        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko03020        [VIEW IN KEGG]
ko05016        [VIEW IN KEGG]
ko05169        [VIEW IN KEGG]
map00230        [VIEW IN KEGG]
map00240        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map03020        [VIEW IN KEGG]
map05016        [VIEW IN KEGG]
map05169        [VIEW IN KEGG]
GOs GO:0000228        [VIEW IN EMBL-EBI]
GO:0000418        [VIEW IN EMBL-EBI]
GO:0000419        [VIEW IN EMBL-EBI]
GO:0000428        [VIEW IN EMBL-EBI]
GO:0000785        [VIEW IN EMBL-EBI]
GO:0000790        [VIEW IN EMBL-EBI]
GO:0000792        [VIEW IN EMBL-EBI]
GO:0002682        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003899        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005720        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005736        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006304        [VIEW IN EMBL-EBI]
GO:0006305        [VIEW IN EMBL-EBI]
GO:0006306        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006952        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009607        [VIEW IN EMBL-EBI]
GO:0009620        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0014070        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016246        [VIEW IN EMBL-EBI]
GO:0016441        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016779        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0030422        [VIEW IN EMBL-EBI]
GO:0030880        [VIEW IN EMBL-EBI]
GO:0031047        [VIEW IN EMBL-EBI]
GO:0031050        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032259        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034062        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0035194        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043207        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043331        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043414        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044452        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044728        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0050776        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050832        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051707        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055029        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061695        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0070918        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071359        [VIEW IN EMBL-EBI]
GO:0071407        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097747        [VIEW IN EMBL-EBI]
GO:0098542        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901698        [VIEW IN EMBL-EBI]
GO:1901699        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGGAAACTGCAAGCGGATGGTGATCAATCACCTGATGTCGCAGATATTGACATGATGGATTTCCTGAATTTGGATGGCGATGGAGAAGGTGACTCCCCCAGAAAGGACAGCACAAAAGGGGACCGGCAGCCTTCTGTCGATGCTGATGTGGATCAGTTTGCCATGGATGTAGATTTGGAAGGACTGCCATCTGTGCAAGATCAAGGGAAAGAAAAGCAGTCTGCTGCTATGGATGTCGATATAACAGGAATACCACCTGTGGAAGATGAAAGGCAGTCTTCTCTAGACCTAAGCACGTTAGTCCCAGTTGACTTCAATGTTGCAAGCCTGGAGAAATTTTGCAATGAAGCGTCAAGATCATTCTTCAGTGAGACTGGACTGGTTAGCCACCAGATAAATTCGTATAACGATTTTGTCTCTCATGGGCTCCAGGATCTCCTTGATTCTTTTGGGGAAGTTACTGTAGAGCCTGATTATGACCCTTCAAATAAACCTTCAAATAAAGATGGTGCTTGGAAACATGCAACTATCAAATTTGGTAAAGTTAAACTTGAGGAGCCAGTGTTCAGGGTTGAAAACAGTGATCTTGAAGTGCAAGATCTCAAGTTGAAGCCTAGACATGCTCTCCTCCAGAAGATGACATATTCATCCAGGATGAATGTAGAAATAACTGTTCAGGTTTATACAGTCGACAAAATTGATAAAGCCAAAACTGGTAATGCTATGCATGTTTCTAGAAGAGATATAATGAAAGAAACTAAACAGGTCAGCATTGGAATGTTACCCGTCATGGTGAAGTCAAATTTGTGCTGGCTGCATAAACTTCAGGAAAGTGAGTGTCAGTTTGATTCTGGTGGCTACTTTTTGATCAAAGGGACGGAAAAGGTATTCATTGCTGAAGAGCAGAGATGTTTATCCAGGATTTGGATCTCAGATCGACCCAGCTTGGATGCAAGTTACCTGAGTGTAATCAAACGAGAAAAGATCCATGTAAAACTTGTTCAGTCTAAAAGGAATGAAAACCGCAAAGTCATCAACATTTCCTTTCTGGGTGCGGTTATGCCAATCTGGGTAGTGTTTTTTGCACTAGGTGTGTCATCAGATAAGGAAGCTTTTGATATGATTGATATACAGGACTGTGATGCTTCTTTGCTCAACATAATATCATCAACTGTGAAAGAATCTCATGAAGAATGTGAAGGCTTTCGCGCTCCCGGTAGAGCTCGTCAGTATGTTGATAAGCTGATCAGAAAAACAAAGTTTCCACCAGAAGAATCCTTTGATGAATATGTTTCCAAGTATATGTTTCCTGATGTCAAAGGGACTAGGAGCAAGGCAATTTTCTTGGGCTACATGGTCAAATGCCTGCTAATGGCTTACTCTGGCAATCGAAAATGTGATAATAAGGATGATTTCCGTAACAAGAGGCTAGATCTTGCCTGCCAGTTGCTTCGGAGAGAAATCTGGTTGCATATTAATTCTATACAAAGACGCATGGTTAAGCTCATGCAGAGAGATTTGAGCTCTGATGGGAACTTACAAGATCTTAGGCGTTATGTGGATGCATCAATTGTTACCAATGGTTTGAACCGGGCTTTCTCCACTGGTTCCTGGCGGCATCCTTATAAATCAGAAAGGTGTTCAGGGGTTGTAGCAACCCTTCGGAGAGCAAATCCACTTCAAATGATGTCTGACTTGAGGAAGACTCGACAGTGGTTTGCATATTCTGGAACAACTGGAGATGCGAGATATCCGAATCCATCCTACTGGGGAAAATTGTGTTTTTTGTCCACCCCTGATGGTGAAAAATGTGGATTCGTGAAAAACCTTGCTGTTACTGCTATGGTTAGCTCTGCAGTGAAGAAACAACTGTGCATTGATACATTTGTTTCTTGTGGAATGAAGAAACTGGATGATAAAATTCCTCTACAAGATATTTCTGGGAAAGACAGGATTTTCTTGAATGGGAACCTGCTTGGAGTGTGTGCAGACCCAGGCGATTTGGTTTCACGTTTAAGAAGCTTGAGGCGTAGCAAACTAATTGAGCCACAGGTTGAAATCAAAAGGGATAGGCACCACAAAGAAATTCGTGTATTTTCTGATCCCGGGAGAATTCTAAGACCACTTCTTGTAGTTGAAAATCTAAGAAGAATCACAAGACCCAAAGCTGGATTGTACTCATTTCAGGAACTTATGCATCAAAATATAATTGAGCTGATTGGTGTTGAAGAAGAGGAGGATATCCGATGTGCTCCTGGAATTAGGCATCTATTCACAAGGGAGAAAGAAGAGGGGCCTTCTGACTATACTCATTGTGAACTTGATCCTTCTTTCTTGCTGGGGTTGAGTTGCAGTCTCATTCCCTTTGCCAACCATGATAATGCTAGGAGGGTTCTGATGCAAGCAGAAAAATTATCGCAGCAGGCTATTGGCTACTTGCCTACAAACTCACGCTCTAGATTTGATACCCTCTCACAAATCTTCTATCCACAGAGACCTTTGTTTAAAACTGTGGTGGCAGACTGTCTTGGAAAGCCAGACTACAGCTTTGGACGAAAAGGTGACTTTACTACACCAGAATATTTCAATGGTCAAAACGCAATAGTCTCCGTCAACGTTCATCAGGGATTTAACCAAGAAGATTCTCTGGTTTTGAATAGGGCCTCTCTAGAGCGTGGCATGTTTCGTACACTACATTTCAAGAGCTATAAAGCCCATGTCGAAAACAAAGAGATCACCAGACGACTCAAACACAAGGAAAAGATCAGTTTTGGTAAAGTGCAAAGCAAGAGGGGGAAGGTTGACAGTCTGGACAATGAGGGTTTACCATATGTTGGAGCAAGTCTTCAAAGTGGTGACATTGTCATTGGGAAGGTCACAGAATCTGGTGAAGATCATAGTCTTAAACTGATGCATACTGAGAAAGGGATGGTAGAGAAGGTACTTCTCTCAGCAAATGATGATGGGATGAACTTTGCAACTGTTACTCTAAGACAGTCTCGTTCACCATGCGTCGGAGACAAGTTTGCCAGCATGCATGGGCAGAAAGGAGTGGTTGGCCTATTGGACTCTCAGGAGAACTTCCCATTTACTTGCCAAGGGATAGTTCCGGACATCGTCATAAACCCACATGGCTTTCCAACTCGTCAAACTCCTGGCCAGTTGCTTGAAGCTGCTTTGGGGAAGGGGATTGCCCTGGGTGGGAAGGTGAGATATGCGACACCGTTCACCACTCCATCCGTGGACGTGATCACTGAACAGTTACACAAGGCCGGTTTTTCAATGTGGGGTGGAGAGAGCGTCCTGAACGGGCAGACCGGTGAGCGGATGAAATCACTGGTCTTCATCGGGCCGACGTTCTACCAGAGGCTCATCCACATGTCCGAGGACAAGGTGAAGTTCCGCAACACAGGACCTGTGCACCCGCTCACGCGGCAGCCGGTGGAGGACAAGAAGCGGTTCGGTGGCGTCAAGTTTGGGGAGATGGAGCGAGACTGCCTCCTTGGCCACGGTGCTGCTGCCAGCCTCCACGAGCGCCTGTTCATGCTAAGCGACTTCTCACAGATGCACATCTGCCAGGCCTGCGAGCGCGTGGCCAACGTTATCATGCGCCCCGACGACTGTGGCAAGAAGGTGCACGGCCCCTACTGCCTCTTCTGCCGGTCCGCAGAGCGCATCGTCCGAATCAATGTGCCTTATGGAGCCAAGCTGCTGTACCAGGAGCTCTTCAGCATGGGAATCTGCCTCAAGTTTGAGACCGAGGTCCGCTAG
Protein:  
MGKLQADGDQSPDVADIDMMDFLNLDGDGEGDSPRKDSTKGDRQPSVDADVDQFAMDVDLEGLPSVQDQGKEKQSAAMDVDITGIPPVEDERQSSLDLSTLVPVDFNVASLEKFCNEASRSFFSETGLVSHQINSYNDFVSHGLQDLLDSFGEVTVEPDYDPSNKPSNKDGAWKHATIKFGKVKLEEPVFRVENSDLEVQDLKLKPRHALLQKMTYSSRMNVEITVQVYTVDKIDKAKTGNAMHVSRRDIMKETKQVSIGMLPVMVKSNLCWLHKLQESECQFDSGGYFLIKGTEKVFIAEEQRCLSRIWISDRPSLDASYLSVIKREKIHVKLVQSKRNENRKVINISFLGAVMPIWVVFFALGVSSDKEAFDMIDIQDCDASLLNIISSTVKESHEECEGFRAPGRARQYVDKLIRKTKFPPEESFDEYVSKYMFPDVKGTRSKAIFLGYMVKCLLMAYSGNRKCDNKDDFRNKRLDLACQLLRREIWLHINSIQRRMVKLMQRDLSSDGNLQDLRRYVDASIVTNGLNRAFSTGSWRHPYKSERCSGVVATLRRANPLQMMSDLRKTRQWFAYSGTTGDARYPNPSYWGKLCFLSTPDGEKCGFVKNLAVTAMVSSAVKKQLCIDTFVSCGMKKLDDKIPLQDISGKDRIFLNGNLLGVCADPGDLVSRLRSLRRSKLIEPQVEIKRDRHHKEIRVFSDPGRILRPLLVVENLRRITRPKAGLYSFQELMHQNIIELIGVEEEEDIRCAPGIRHLFTREKEEGPSDYTHCELDPSFLLGLSCSLIPFANHDNARRVLMQAEKLSQQAIGYLPTNSRSRFDTLSQIFYPQRPLFKTVVADCLGKPDYSFGRKGDFTTPEYFNGQNAIVSVNVHQGFNQEDSLVLNRASLERGMFRTLHFKSYKAHVENKEITRRLKHKEKISFGKVQSKRGKVDSLDNEGLPYVGASLQSGDIVIGKVTESGEDHSLKLMHTEKGMVEKVLLSANDDGMNFATVTLRQSRSPCVGDKFASMHGQKGVVGLLDSQENFPFTCQGIVPDIVINPHGFPTRQTPGQLLEAALGKGIALGGKVRYATPFTTPSVDVITEQLHKAGFSMWGGESVLNGQTGERMKSLVFIGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVEDKKRFGGVKFGEMERDCLLGHGAAASLHERLFMLSDFSQMHICQACERVANVIMRPDDCGKKVHGPYCLFCRSAERIVRINVPYGAKLLYQELFSMGICLKFETEVR